BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G05LP1|AL428106
(1025 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig878 919 0.0
>3x_Contig878
Length = 4897
Score = 919 bits (455), Expect = 0.0
Identities = 567/595 (95%), Gaps = 12/595 (2%)
Strand = Plus / Minus
Query: 431 ctaagccggttttcgctcagtagtcatcmgggttcccaactgataaatatttgytgcttc 490
||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 4637 ctaagccggttttcgttcagtagtcatcagggttcccaactgataaatatttgttgcttc 4578
Query: 491 catctcccagatgaatatasagttttacccmactggcaactatgcagcaaacttgctaat 550
||| ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||
Sbjct: 4577 catttcccagatgaatatagagttttacccaactggcaactatgcagttaacttgctaat 4518
Query: 551 cgataaaccaaaagatacytyacatcmtatttgattgtttacaggtgtacatacttctga 610
|||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||
Sbjct: 4517 cgataaaccaaaagatactttacattatatttgattgtttacaggtgtacatacttctga 4458
Query: 611 taaaagaactagygaaaattagtagtgacccacytatttcacgagttcgacgttgacttt 670
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4457 taaaagaactagtgaaaattagtagtgacccacttatttcacgagttcgacgttgacttt 4398
Query: 671 ggtagtgtcaccyttgttacacgcacgacgttcaccttctctcgtcgsacgccccaaatt 730
|||||||||||| |||||| ||| |||||||| ||||||| |||||| ||| ||||||||
Sbjct: 4397 ggtagtgtcacctttgtta-acg-acgacgtt-accttct-tcgtcg-acg-cccaaatt 4344
Query: 731 gtttgacttgttttgaacaatttcctcttgtttcagcatgcggtcaactcttcgttctgc 790
| |||||||| ||||||||| ||||||||| ||||||| |||||||||||||||||||||
Sbjct: 4343 g-ttgacttg-tttgaacaa-ttcctcttg-ttcagca-gcggtcaactcttcgttctgc 4289
Query: 791 ttacgttttaaatagtagcttggcttcaattgtctcagttttagattcttacagaatggt 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 ttacgttttaaatagtagcttggcttcaattgtctcagttttagattcttacagaatggt 4229
Query: 851 aaatggccatttctttcttcgtacatcattagtccgataacaatcattaagaccaaccag 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 aaatggccatttctttcttcgtacatcattagtccgataacaatcattaagaccaaccag 4169
Query: 911 tacaagttgtaagcaaggatggatgacaaataaccagtgttttgccagcccaacaacgag 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4168 tacaagttgtaagcaaggatggatgacaaataaccagtgttttgccagcccaacaacgag 4109
Query: 971 ttgaagatatcccaaccgkttgtccaattccggggtacaacagttaacgtggtac 1025
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 4108 ttgaagatatcccaaccg-ttgtccaattccgggttacaacagttaacgtggtac 4055
Score = 309 bits (153), Expect = 8e-84
Identities = 193/206 (93%), Gaps = 5/206 (2%)
Strand = Plus / Minus
Query: 175 tcaastgttgtgcastgycttctccgccaatgtcgcaccggaaattagaaaaagaaattt 234
|||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4879 tcaagtgttgtgcagtgtcttctccgccaatgt-gcaccggaaattagaaaaagaaattt 4821
Query: 235 catttcgacatgcttcgagtacggcacctcstcaagctgcgttcttctgtcttattcgcg 294
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |
Sbjct: 4820 catttcgacatgcttcgaga--ggcacctcgtcaagctgcgttcttctgtcttattcg-g 4764
Query: 295 atggtaagggyaggacgacacawacatcawtatactctgtactaacagcgttgggcaagg 354
|||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 4763 atggtaagggtaggacgacacatacatcattatactctgtactaacagcgttgggcaagg 4704
Query: 355 tgcgcgagacgtacacacgccattgt 380
|||| |||||||||||||||||||||
Sbjct: 4703 tgcg-gagacgtacacacgccattgt 4679
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,601
Number of Sequences: 1807
Number of extensions: 18601
Number of successful extensions: 5801
Number of sequences better than 1.0e-20: 1
length of query: 1025
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1009
effective length of database: 10,329,639
effective search space: 10422605751
effective search space used: 10422605751
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)